camping summer

check-battery.sh

@@ -5,11 +5,13 @@
 
 BATTERY=/sys/class/power_supply/BAT0
 
-REM=`grep "POWER_SUPPLY_CHARGE_NOW" $BATTERY/uevent | awk -F= '{ print $2 }'`
+# REM=`grep "POWER_SUPPLY_CHARGE_NOW" $BATTERY/uevent | awk -F= '{ print $2 }'`
-FULL=`grep "POWER_SUPPLY_CHARGE_FULL_DESIGN" $BATTERY/uevent | awk -F= '{ print $2 }'`
+# FULL=`grep "POWER_SUPPLY_CHARGE_FULL_DESIGN" $BATTERY/uevent | awk -F= '{ print $2 }'`
+REM=`grep -i "charge_now" $BATTERY/uevent | awk -F= '{ print $2 }'`
+FULL=`grep -i "charge_full_design" $BATTERY/uevent | awk -F= '{ print $2 }'`
 PERCENT=`echo $(( $REM * 100 / $FULL ))`
 
-if [ $PERCENT -le "33" ]; then
+if [ $PERCENT -le "11" ]; then
   #/usr/bin/i3-nagbar -m "Low battery"
   #echo 'low battery '$PERCENT
   notify-send --urgency=critical "Low battery $PERCENT%"

sbib

@@ -22,6 +22,7 @@ if [ "$1" == "-h" ] ; then
           zathura (or other fast pdf viewer)
           echo
           wl-copy
+          jq
 
          defaults:
           Set the required default file locations (csl file, bib file)

sdoi.sh

@@ -8,7 +8,7 @@ if [ "$1" == "-h" ] ; then
           sdoi.sh 'doi' download.pdf
 
          depends: 
-          xsltproc - xml processor, from GNOME project
+          xsltproc, xmllint - xml processing programs from libxml
           pubmed2bibtex.xsl - xml processor stylesheet
 
          defaults:
@@ -57,14 +57,13 @@ fetchBib_doiDotOrg() {
 extract_name() {
   #extract some strings to make a nice filename for the pdf
   key="LastName"; 
-  author=$(grep $key --max-count=1 $tmpBib.xml | sed -E "s|\W*<$key>(.+)</$key>\W*|\1|" | tr -d " ")
+  author=$(xmllint --xpath "string(//$key)" $tmpBib.xml)
 
   key="MedlineTA"; 
-  journal=$(grep $key --max-count=1 $tmpBib.xml | sed -E "s|\W*<$key>(.+)</$key>\W*|\1|" | tr -d " ")
+  journal=$(xmllint --xpath "string(//$key)" $tmpBib.xml)
-
-  key1="PubDate"; 
-  key2="Year"; year=$(awk "/<$key1>/,/<\/$key1>/" $tmpBib.xml | grep $key2 | sed -E "s|\W*<$key2>(.+)</$key2>\W*|\1|")
 
+  key="Year";
+  year=$(xmllint --xpath "string(//$key)" $tmpBib.xml)
 }
 
 append_bibfile() {
@@ -81,6 +80,7 @@ append_bibfile() {
 
 append_pdf() {
   fn2=${author}_${journal}$year-$uid.pdf
+  echo $fn2
   #move pdf file to papers repository, add file name to bibtex url field
   mv $fn $pdfPathOut/$fn2
   echo "moved to $pdfPathOut/$fn2"

spdf.sh

@@ -8,7 +8,7 @@ if [ "$1" == "-h" ] ; then
 
          depends:
           pdftotext - from ghostscript or poppler or texlive ?
-          xsltproc - xml processor, from GNOME project
+          xsltproc, xmllint - xml programs from libxml
           pubmed2bibtex.xsl - xml processor stylesheet
 
          defaults:
@@ -26,26 +26,14 @@ fn=$1
 
 #try to extract doi from pdf and retrieve a pubmed id
 #for 'DOI:' syntax
-# doi=$(pdftotext -q -f 1 -l 1 $fn - | grep -i "doi:" --max-count=1 | tr [:upper:] [:lower:] | sed -E "s|doi:(.+)|\1|")
-
 # search for doi string between first page last page 10
 doi=$(pdftotext -q -f 1 -l 10 $fn - | grep -iE "doi:? ?/?10\." --max-count=1 | tr [:upper:] [:lower:] | sed -E "s|.*doi:? ?/?(10.+)|\1|")
 
-
 #for 'https://doi.org' syntax
 if [ -z "$doi" ]; then
   doi=$(pdftotext -q -f 1 -l 1 $fn - | grep -iE "doi\.org/10\." --max-count=1 | tr [:upper:] [:lower:] | sed -E "s|.+doi\.org/(10.+)|\1|")
 fi
 
-# for 'https://doi.org' syntax
-# if [ -z "$doi" ]; then
-  # doi=$(pdftotext -q -f 1 -l 1 $fn - | grep -i "doi.org/" --max-count=1 | tr [:upper:] [:lower:] | sed -E "s|.+doi\.org\/(.+)|\1|")
-# fi
-# 
-# if [ -z "$doi" ]; then
-# doi=$(pdftotext -q -f 1 -l 1 $fn - | grep -iE "doi ?" --max-count=1 | tr [:upper:] [:lower:] | sed -E "s|doi ?(.+)|\1|")
-# fi
-
 if [ -z "$doi" ]; then
   echo "doi not found"
   exit 1

spmid.sh

@@ -6,9 +6,6 @@ if [ "$1" == "-h" ] ; then
           spmid.sh '12345678'
           spmid.sh '12345678' download.pdf
 
-         depends: 
-          sdoi.sh
- 
     "
     exit 0
 fi
@@ -55,14 +52,13 @@ fetchBib_doiDotOrg() {
 extract_name() {
   #extract some strings to make a nice filename for the pdf
   key="LastName"; 
-  author=$(grep $key --max-count=1 $tmpBib.xml | sed -E "s|\W*<$key>(.+)</$key>\W*|\1|" | tr -d " ")
+  author=$(xmllint --xpath "string(//$key)" $tmpBib.xml)
 
   key="MedlineTA"; 
-  journal=$(grep $key --max-count=1 $tmpBib.xml | sed -E "s|\W*<$key>(.+)</$key>\W*|\1|" | tr -d " ")
+  journal=$(xmllint --xpath "string(//$key)" $tmpBib.xml)
-
-  key1="PubDate"; 
-  key2="Year"; year=$(awk "/<$key1>/,/<\/$key1>/" $tmpBib.xml | grep $key2 | sed -E "s|\W*<$key2>(.+)</$key2>\W*|\1|")
 
+  key="Year";
+  year=$(xmllint --xpath "string(//$key)" $tmpBib.xml)
 }
 
 append_bibfile() {

spubmed.sh

@@ -6,13 +6,6 @@ if [ "$1" == "-h" ] ; then
          usage:
           spubmed.sh 'kaas' 'trends+neurosci' '1995'
           spubmed.sh 'rakic' 'j+comp+neurol' '1972'
-
-         depends: 
-          xsltproc - xml processor, from GNOME project
-          pubmed2bibtex.xsl - xml processor stylesheet
-
-         defaults:
-          Set the three required default file locations (xsl file, bib file, pdf directory)
  
     "
     exit 0