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ackman678
2021-05-29 08:19:30 -04:00
parent 61cc931e94
commit 3cb839de7a
3 changed files with 37 additions and 37 deletions
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60
sbib
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@@ -39,47 +39,47 @@ set -e #exit if an error
view_bib() {
# Use fzf to search citation
# Initial scroll offset is set to the line number of each line
# of git grep output *minus* 5 lines (-5)
# str=$(cat $fn | fzf)
# Use fzf to search citation
# Initial scroll offset is set to the line number of each line
# of git grep output *minus* 5 lines (-5)
# str=$(cat $fn | fzf)
# str=$(git grep -E --line-number $sPattern $bibdFile | fzf --delimiter : --preview 'nl {1} --body-numbering=a' --preview-window=:up:70%:+{2}-5)
# str=$(git grep -E --line-number $sPattern $bibdFile | fzf --delimiter : --preview 'less {1}' --preview-window=:up:70%:+{2}-5)
str=$(git grep -E --line-number $sPattern $bibdFile | fzf --delimiter : --preview 'bat --color=always --style=numbers --line-range=:500 {1}' --preview-window=:up:70%:+{2}-5)
# str=$(git grep -E --line-number $sPattern $bibdFile | fzf --delimiter : --preview 'nl {1} --body-numbering=a' --preview-window=:up:70%:+{2}-5)
# str=$(git grep -E --line-number $sPattern $bibdFile | fzf --delimiter : --preview 'less {1}' --preview-window=:up:70%:+{2}-5)
str=$(git grep -E --line-number $sPattern $bibdFile | fzf --delimiter : --preview 'bat --color=always --style=numbers --line-range=:500 {1}' --preview-window=:up:70%:+{2}-5)
# extract citation key from the fzf string
citeKey=$(echo $str | sed -E "s|$(basename $bibdFile):[0-9]+:@[a-zA-Z]+\{(.+),|\1|")
# extract citation key from the fzf string
citeKey=$(echo $str | sed -E "s|$(basename $bibdFile):[0-9]+:@[a-zA-Z]+\{(.+),|\1|")
#method1
#todo: use json with jq
# outCitation=$(pandoc -f latex <(echo "\cite{$citeKey}") -t plain -o - --bibliography $bibdFile --citeproc --csl $cslFile | tail -n +3)
#method1
#todo: use json with jq
# outCitation=$(pandoc -f latex <(echo "\cite{$citeKey}") -t plain -o - --bibliography $bibdFile --citeproc --csl $cslFile | tail -n +3)
#method2
#need to use a temporary bib file as input to pandoc because parsing a large bib file is too slow, but json input would be faster
#and because pandoc expects a file input for bibliography
tmpName=$(mktemp --suffix=.bib)
str3=$(grep -A 30 $citeKey $bibdFile)
echo $str3 | sed -E "s|(.+\} ?\}).+|\1|" > $tmpName
outCitation=$(pandoc -f latex <(echo "\cite{$citeKey}") -t plain -o - --bibliography $tmpName --citeproc --csl $cslFile | tail -n +3)
rm $tmpName
#method2
#need to use a temporary bib file as input to pandoc because parsing a large bib file is too slow, but json input would be faster
#and because pandoc expects a file input for bibliography
tmpName=$(mktemp --suffix=.bib)
str3=$(grep -A 30 $citeKey $bibdFile)
echo $str3 | sed -E "s|(.+\} ?\}).+|\1|" > $tmpName
outCitation=$(pandoc -f latex <(echo "\cite{$citeKey}") -t plain -o - --bibliography $tmpName --citeproc --csl $cslFile | tail -n +3)
rm $tmpName
#tail -n +61 $fn | sed -E "s#(.+\}\})#\1#"
# fzf --preview="head {}" --preview-window=up:30%
# fzf --preview="file {}" --preview-window=down:1
echo $outCitation
echo $outCitation | wl-copy
#tail -n +61 $fn | sed -E "s#(.+\}\})#\1#"
# fzf --preview="head {}" --preview-window=up:30%
# fzf --preview="file {}" --preview-window=down:1
echo $outCitation
echo $outCitation | wl-copy
}
view_json() {
# export citeKey=$1
# doiStr=$(jq -r '.[] | select(.id==env.citeKey).DOI' $bibdFile)
# urlStr=$(jq -r '.[] | select(.id==env.citeKey).URL' $bibdFile)
# export citeKey=$1
# doiStr=$(jq -r '.[] | select(.id==env.citeKey).DOI' $bibdFile)
# urlStr=$(jq -r '.[] | select(.id==env.citeKey).URL' $bibdFile)
#actually this is the good one, opens pdfs quickly
jq -r '.[] | [.id, .title, .abstract, .keyword, .DOI, .PMID, .author[]?.family, .issued[]?[0]?[0], .["container-title"], .URL] | join(" ")' $bibdFile | fzf --preview 'echo {}' --preview-window=:up:70%:wrap --bind "enter:execute-silent(zathura {-1} &)"
#actually this is the good one, opens pdfs quickly
jq -r '.[] | [.id, .title, .abstract, .keyword, .DOI, .PMID, .author[]?.family, .issued[]?[0]?[0], .["container-title"], .URL] | join(" ")' $bibdFile | fzf --preview 'echo {}' --preview-window=:up:70%:wrap --bind "enter:execute-silent(zathura {-1} &)"
}