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sbib improve and rg bool

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ackman678
2023-05-15 10:49:24 -04:00
parent 26d1974906
commit d328524cd9
14 changed files with 171 additions and 52 deletions
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47
sbib
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@@ -12,13 +12,20 @@ if [ "$1" == "-h" ] ; then
# pass a custom citation style and database
sbib a citeprocStyle.csl bibdFile.json
Then press <enter> to open pdf
and press <ctrl-c> to copy citation to clipboard
note:
# to convert a bib to json, run
# pandoc bibdFile.bib -t csljson -o bibdFile.json
depends:
fzf
git grep
sed tail
bat or less
pandoc
pandoc-citeproc
fetch_citation, pandoc, pandoc-citeproc
zathura (or other fast pdf viewer)
echo
wl-copy
@@ -32,9 +39,9 @@ if [ "$1" == "-h" ] ; then
fi
#Setup defaults
cslFile=${2:-$HOME/projects/bibd/bibd-md.csl}
bibdFile=${3:-$HOME/projects/bibd/OMEGA.bib}
# bibdFile=${2:-$HOME/projects/bibd/OMEGA.json}
cslFile=${2:-$HOME/projects/learn/bibd/bibd-md.csl}
bibdFile=${3:-$HOME/projects/learn/bibd/OMEGA.bib}
# bibdFile=${2:-$HOME/projects/learn/bibd/OMEGA.json}
cd $(dirname $bibdFile)
set -e #exit if an error
@@ -49,28 +56,9 @@ view_bib() {
# str=$(git grep -E --line-number $sPattern $bibdFile | fzf --delimiter : --preview 'less {1}' --preview-window=:up:70%:+{2}-5)
str=$(git grep -E --line-number $sPattern $bibdFile | fzf --delimiter : --preview 'bat --color=always --style=numbers --line-range=:500 {1}' --preview-window=:up:70%:+{2}-5)
# extract citation key from the fzf string
citeKey=$(echo $str | sed -E "s|$(basename $bibdFile):[0-9]+:@[a-zA-Z]+\{(.+),|\1|")
#method1
#todo: use json with jq
# outCitation=$(pandoc -f latex <(echo "\cite{$citeKey}") -t plain -o - --bibliography $bibdFile --citeproc --csl $cslFile | tail -n +3)
#method2
#need to use a temporary bib file as input to pandoc because parsing a large bib file is too slow, but json input would be faster
#and because pandoc expects a file input for bibliography
tmpName=$(mktemp --suffix=.bib)
str3=$(grep -A 30 $citeKey $bibdFile)
echo $str3 | sed -E "s|(.+\} ?\}).+|\1|" > $tmpName
outCitation=$(pandoc -f latex <(echo "\cite{$citeKey}") -t plain -o - --bibliography $tmpName --citeproc --csl $cslFile | tail -n +3)
rm $tmpName
#tail -n +61 $fn | sed -E "s#(.+\}\})#\1#"
# fzf --preview="head {}" --preview-window=up:30%
# fzf --preview="file {}" --preview-window=down:1
echo $outCitation
echo $outCitation | wl-copy
fetch_citation citeKey
}
@@ -80,9 +68,12 @@ view_json() {
# urlStr=$(jq -r '.[] | select(.id==env.citeKey).URL' $bibdFile)
#actually this is the good one, opens pdfs quickly
jq -r '.[] | [.id, .title, .abstract, .keyword, .DOI, .PMID, .author[]?.family, .issued[]?[0]?[0], .["container-title"], .URL] | join(" ")' $bibdFile | fzf --preview 'echo {}' --preview-window=:up:70%:wrap --bind "enter:execute-silent(zathura {-1} &)"
}
jq -r '.[] | [.id, .title, .abstract, .keyword, .DOI, .PMID, .author[]?.family, .issued[]?[0]?[0], .["container-title"], .URL] | join(" ")' $bibdFile | fzf --preview 'echo {}' --preview-window=:up:70%:wrap \
--bind "enter:execute-silent(zathura {-1} &)" \
--bind "ctrl-c:execute-silent(fetch_citation {1})"
# --bind "ctrl-c:execute(notify-send {1})"
}
#set pattern to the null character '\0' for search all, else search only cite keys
@@ -93,7 +84,7 @@ else
fi
if [ "$1" == "j" ]; then
bibdFile=${3:-$HOME/projects/bibd/OMEGA.json}
bibdFile=${3:-$HOME/projects/learn/bibd/OMEGA.json}
view_json
else
view_bib