jackman/opencv-test
1
0
Fork 0
Code Issues Pull Requests Releases Wiki Activity

py nb

Browse Source
This commit is contained in:
ackman678
2018-11-16 16:24:21 -08:00
parent 5c0b7fbc52
commit 06260589fd
3 changed files with 1463 additions and 2 deletions
Download Patch File Download Diff File Expand all files Collapse all files

663
2016-06-15-opencv-RGBmasks-xcorr.ipynb Normal file
View File

File diff suppressed because one or more lines are too long

783
2016-06-17-opencv-dfof.ipynb Normal file
View File

File diff suppressed because one or more lines are too long

19
README.md
View File

@@ -1,3 +1,18 @@
# test
---
date: 2016-06-20 16:22:23
tags: analysis, python, wholeBrain, data visualization
author: James B. Ackman
---
hello there
# python opencv testing
This is a python/opencv analysis repo to test:
* read capability of hdf5 matlab d2r.mat files with h5py and hemispheric symmetry calculations using numpy/opencv
* read capability of tiff movies and make dF/F (F-F0/F0) normalization and display using numpy/opencv
The python notebooks have contain some subfunctions and routines that are potentially instructive. The images saved in assets are a number of snapshot frame of bi-hemispheric activity patterns that were saved by pressing `s` while playing movies in `2016-06-15-opencv-RGBmasks-xcorr.ipynb`
See also [anaconda python installation and opencv setup instructions](http://ackmanlab.com/2016/06/20/install-ipython.html)
For companion functions based on some of the scripts implemented in these notebooks see `hemisphereXcorr.py` and `playtiffmovie.py` at [pyWholeBrain](https://github.com/ackmanlab/pyWholeBrain).